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GenotypeGVCFs memory issues on GATK 4.6.0.0
carrot-test-run-from-pr-comment #5305: Issue comment #8918 (comment) created by Wangchangsh
October 23, 2024 02:23 12s
October 23, 2024 02:23 12s
Memory leak in GenotypeGVCFs with -all-sites
carrot-test-run-from-pr-comment #5304: Issue comment #8989 (comment) created by gokalpcelik
October 22, 2024 21:24 9s
October 22, 2024 21:24 9s
GenotypeGVCFs memory issues on GATK 4.6.0.0
carrot-test-run-from-pr-comment #5303: Issue comment #8918 (comment) created by gokalpcelik
October 22, 2024 21:23 9s
October 22, 2024 21:23 9s
Add a few additional failures to our notes doc
carrot-test-run-from-pr-comment #5302: Issue comment #8980 (comment) created by kbergin
October 22, 2024 20:55 14s
October 22, 2024 20:55 14s
PR #9015
CodeQL #623: by gbggrant
October 22, 2024 20:36 11m 21s
October 22, 2024 20:36 11m 21s
VS-1476. Removing All usage of VQSR from VDS creation.
Build and Test GATK 4 #4794: Pull request #9015 synchronize by gbggrant
October 22, 2024 20:36 1h 23m 15s gg_VS-1476_RemoveVQSRFromVDS
October 22, 2024 20:36 1h 23m 15s
PR #9006
CodeQL #622: by lbergelson
October 22, 2024 20:20 8m 28s
October 22, 2024 20:20 8m 28s
Additional Dependency updates
Build and Test GATK 4 #4793: Pull request #9006 synchronize by lbergelson
October 22, 2024 20:20 51m 20s lb_security_fix
October 22, 2024 20:20 51m 20s
PR #8996
CodeQL #621: by kjaisingh
October 22, 2024 20:03 11m 37s
October 22, 2024 20:03 11m 37s
Create tools for SV VCF cleaning
Build and Test GATK 4 #4792: Pull request #8996 synchronize by kjaisingh
October 22, 2024 20:03 52m 8s kj_sv_cleanvcf
October 22, 2024 20:03 52m 8s
PR #8996
CodeQL #620: by kjaisingh
October 22, 2024 19:48 11m 38s
October 22, 2024 19:48 11m 38s
Create tools for SV VCF cleaning
Build and Test GATK 4 #4791: Pull request #8996 synchronize by kjaisingh
October 22, 2024 19:48 51m 34s kj_sv_cleanvcf
October 22, 2024 19:48 51m 34s
PR #8996
CodeQL #619: by kjaisingh
October 22, 2024 19:38 11m 24s
October 22, 2024 19:38 11m 24s
Create tools for SV VCF cleaning
Build and Test GATK 4 #4790: Pull request #8996 synchronize by kjaisingh
October 22, 2024 19:38 54m 3s kj_sv_cleanvcf
October 22, 2024 19:38 54m 3s
PR #9012
CodeQL #618: by jamesemery
October 22, 2024 17:45 11m 13s
October 22, 2024 17:45 11m 13s
PR #9012
CodeQL #617: by jamesemery
October 22, 2024 16:05 10m 51s
October 22, 2024 16:05 10m 51s
Added a '--prefer-mane-transcripts' mode that enforces MANE_Select tagged Gencode transcripts where possible
carrot-test-run-from-pr-comment #5301: Issue comment #9012 (comment) created by jamesemery
October 22, 2024 16:04 12s
October 22, 2024 16:04 12s
PR #9015
CodeQL #616: by gbggrant
October 22, 2024 15:45 11m 29s
October 22, 2024 15:45 11m 29s
VS-1476. Removing All usage of VQSR from VDS creation.
Build and Test GATK 4 #4787: Pull request #9015 synchronize by gbggrant
October 22, 2024 15:45 1h 17m 17s gg_VS-1476_RemoveVQSRFromVDS
October 22, 2024 15:45 1h 17m 17s
GenotypeGVCFs memory issues on GATK 4.6.0.0
carrot-test-run-from-pr-comment #5300: Issue comment #8918 (comment) created by Wangchangsh
October 22, 2024 09:31 12s
October 22, 2024 09:31 12s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #931: Scheduled
October 22, 2024 05:23 11m 17s master
October 22, 2024 05:23 11m 17s
Additional Dependency updates
Build and Test GATK 4 #4786: Pull request #9006 synchronize by lbergelson
October 21, 2024 21:59 50m 59s lb_security_fix
October 21, 2024 21:59 50m 59s
PR #9006
CodeQL #615: by lbergelson
October 21, 2024 21:59 8m 19s
October 21, 2024 21:59 8m 19s