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DESCRIPTION
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DESCRIPTION
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Package: hdWGCNA
Title: hdWGCNA
Version: 0.4.00
Authors@R: c(
person("Sam", "Morabito", , "[email protected]", role = c("aut", "cre"),
comment = c(ORCID = "0000-0002-7768-4856")),
person("Zechuan", "Shi", , "[email protected]", role = c("ctb"),
comment = c(ORCID = "0000-0002-2844-5816")),
person("Swarup Lab", role = "fnd")
)
Description: hdWGCNA is an R package for performing weighted gene co-expression network analysis in high dimensional -omics such as single-cell RNA-seq or spatial transcriptomics.
License: GNU GPLv3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
URL: https://smorabit.github.io/hdWGCNA/, https://github.com/smorabit/hdWGCNA
Imports: WGCNA, Seurat, Matrix, harmony, igraph, enrichR, ggplot2, dplyr, tester, proxy
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
Depends:
R (>= 2.10),
harmony (>= 1.0.1),
Seurat (>= 4.0.0),
ggrepel (>= 0.9.0),
WGCNA,
dplyr,
igraph,
ggraph,
tidygraph,
ggrepel,
UCell,
GeneOverlap,
GenomicRanges