Skip to content

Issues: YuLab-SMU/MicrobiotaProcess

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

83 Open 35 Closed
83 Open 35 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

alpha index statistics
#124 opened Sep 15, 2024 by altuda
Issue in ggdiffclade
#123 opened Jul 24, 2024 by scoob24
1
rarefy Abundance and rare abundance
#122 opened May 6, 2024 by Muneer111
Exporting MPSE generated variables
#121 opened May 5, 2024 by EsbergA
2
Using mp_diff_analysis for FAPROTAX functional data and visualization
#120 opened May 1, 2024 by MizaR108
如何通过物种丰度矩阵，物种分类表，样本分组信息构建MPSE对象
#118 opened Apr 12, 2024 by zyc134
ggrarecurve报错Error in if (obj %>% rowSums %>% var != 0 && !force)
#117 opened Apr 7, 2024 by Elixir0822
Report: Large memory usage when run mp_cal_abundance
#115 opened Mar 5, 2024 by alienzj
1
Possible to calculate diff_analysis with less than 5 sample per group ?
#113 opened Dec 22, 2023 by UpalabdhaD
2
add labels to plot from ggrarecurve
#111 opened Dec 13, 2023 by soluna1
diff_analysis with multiple groups
#110 opened Dec 5, 2023 by dalferes
diff_analysis without rarefying
#109 opened Dec 5, 2023 by cmetadea
diff_analysis in ver 1.14.0
#108 opened Dec 1, 2023 by RIJP-SU
Confidance interval returns NA values
#107 opened Nov 9, 2023 by sirusb
mp_diff_analysis with CoDA algorithms
#106 opened Nov 5, 2023 by MEladawi
Error occurred while parsing the output of qiime2
#102 opened Aug 24, 2023 by LaitingChoi
How to add the p value to the marginal box-andwhisker of the PCo plot
#101 opened Aug 23, 2023 by J5886
Include the percentage values in the stacked plots
#100 opened Aug 18, 2023 by antoniobio
5
rmun NOT work by default
#99 opened Aug 17, 2023 by holypeggy
1
updated mp_import_humann_regroup to keep the abundance of contributed taxa
#98 opened Aug 15, 2023 by xiangpin
Two question about import qiime2 files
#97 opened Aug 3, 2023 by Rainjie-afk
2
The normalisation in getpcoa() function does not work
#96 opened Jul 26, 2023 by fernando-aq
2
关于mp_import_metaphlan中输入treefile错误的问题
#95 opened Jul 17, 2023 by Brynnhildr
2
如何调整Biomarker可视化过程中，显示label的数量
#94 opened Jun 7, 2023 by liuninghua521
3
test_differential_abundance with batch effect
#93 opened May 19, 2023 by MEladawi
3
ProTip! Adding no:label will show everything without a label.